[blyth@belle7 patches]$ pwd
/data1/env/local/dybx/NuWa-trunk/lcgcmt/LCG_Builders/geant4/patches
[blyth@belle7 patches]$ svn log -l10 -v
------------------------------------------------------------------------
r22636 | blyth | 2014-03-05 20:23:17 +0800 (Wed, 05 Mar 2014) | 1 line
Changed paths:
M /lcgcmt/trunk/LCG_Builders/geant4/cmt/requirements
M /lcgcmt/trunk/LCG_Builders/geant4/patches/geant4.9.2.p01.patch.patch2_source_persistency_GNUmakefile.patch
M /lcgcmt/trunk/LCG_Builders/geant4/scripts/geant4_config.sh
minor: change to tag geant4_with_dae to be closer to geant4 conventions
------------------------------------------------------------------------
r22635 | blyth | 2014-03-05 19:51:25 +0800 (Wed, 05 Mar 2014) | 1 line
Changed paths:
A /lcgcmt/trunk/LCG_Builders/geant4/patches/geant4.9.2.p01.patch.patch2_source_materials_include_G4MaterialPropertiesTable.hh.patch
A /lcgcmt/trunk/LCG_Builders/geant4/patches/geant4.9.2.p01.patch.patch2_source_materials_include_G4MaterialPropertyVector.hh.patch
A /lcgcmt/trunk/LCG_Builders/geant4/patches/geant4.9.2.p01.patch.patch2_source_materials_src_G4MaterialPropertyVector.cc.patch
A /lcgcmt/trunk/LCG_Builders/geant4/patches/geant4.9.2.p01.patch.patch2_source_persistency_GNUmakefile.patch
A /lcgcmt/trunk/LCG_Builders/geant4/patches/geant4.9.2.p01.patch.patch2_source_persistency_gdml_include_G4GDMLWrite.hh.patch
A /lcgcmt/trunk/LCG_Builders/geant4/patches/geant4.9.2.p01.patch.patch2_source_persistency_gdml_src_G4GDMLWrite.cc.patch
A /lcgcmt/trunk/LCG_Builders/geant4/patches/geant4.9.2.p01.patch.patch2_source_visualization_VRML_src_G4VRML2FileSceneHandler.cc.patch
M /lcgcmt/trunk/LCG_Builders/geant4/scripts/geant4_config.sh
minor: geant4 patches needed to integrate building G4DAE geometry export as COLLADA DAE documents functionaity, NOT ENABLED BY DEFAULT, requires CMTEXTRATAGS to include '''geant4_with_g4dae'''. notes at e/geant4/nuwa/create_incremental_patch
Given slave monopolization of the ~/.dybinstrc override file and the fact that only the first existing override file is adhered to, it is not convenient to configure a setting like the below in the override file:
global_extra=geant4_with_gdml,geant4_with_dae
More convenient to do this with a dybinst command line option analogous to switching on optimized building, this would allow multiple installs on the same node with geometry export capability enabled in one of them
Is a CMTEXTRATAGS addition the appropriate way to implement the fork.
Tag ‘’‘geant4_with_gdml’‘’ should cause building of libG4gdml.so
Older Geant4 requires patches:
Hailing from before GDML was included with G4 ?
- NuWa-trunk/lcgcmt/LCG_Interfaces/GDML/cmt/requirements
A separate builder would need intimate access to Geant4 build:
[blyth@belle7 LCG_Builders]$ grep Geant4 */cmt/requirements
geant4/cmt/requirements:macro geant4_srcdir "geant${Geant4_config_version}"
geant4/cmt/requirements:apply_pattern buildscripts_project_local destdir=${LCG_reldir}/geant4/${Geant4_config_version}/${LCG_CMTCONFIG}
geant4/cmt/requirements:set LCG_tarfilename "geant${Geant4_config_version}.tar.gz"
geant4/cmt/requirements:macro LCG_sourcefiles "geant${Geant4_config_version}.tar.gz"
geant4/cmt/requirements:set G4INSTALL "${LCG_builddir}/geant$(Geant4_config_version)"
openscientistvis/cmt/requirements:use Geant4 v* LCG_Interfaces
[blyth@belle7 LCG_Builders]$
[blyth@belle7 LCG_Builders]$
[blyth@belle7 LCG_Builders]$ pwd
/data1/env/local/dyb/NuWa-trunk/lcgcmt/LCG_Builders
The OSC scripts are complicated because of this
Ape the geant4 build with
fenv
cd $SITEROOT/lcgcmt/LCG_Builders/geant4/cmt
cmt config
. setup.sh
cmt pkg_get # looks to not use the script
cmt pkg_config # could kludge svn checkout and patch GNUMakefile in here
cmt pkg_make
cmt pkg_install
Considered a separate LCG_Builder for g4dae, but that makes things more complicated. It is essentially a rather extended patch against Geant4.
./dybinst -X geant4_with_dae trunk projects relax gaudi # untouched ?
./dybinst -X geant4_with_dae trunk projects lhcb # needs CMT attention
./dybinst -X geant4_with_dae trunk projects dybgaudi
Not used ?:
[blyth@belle7 relax]$ find . -name requirements -exec grep -H eant4 {} \;
./Dictionaries/GeantFourRflx/v8r0p01/cmt/requirements:macro Geant4_native_version "8.0.p01"
./Dictionaries/GeantFourRflx/v8r0p01/cmt/requirements:macro Geant4__8_0_p01__Rflx_use_linkopts " -L$(Geant4_home)/lib \
./Dictionaries/GeantFourRflx/v8r0p01/cmt/requirements:apply_pattern relax_dictionary dictionary=Geant4__8_0_p01__ \
./Dictionaries/GeantFourRflx/v8r0p01/cmt/requirements: headerfiles=$(GEANTFOURRFLXROOT)/dict/Geant4Dict.h \
./Dictionaries/GeantFourRflx/v9r0p01/cmt/requirements:macro Geant4_native_version "9.0.p01"
./Dictionaries/GeantFourRflx/v9r0p01/cmt/requirements:macro Geant4__9_0_p01__Rflx_use_linkopts " -L$(Geant4_home)/lib \
./Dictionaries/GeantFourRflx/v9r0p01/cmt/requirements:apply_pattern relax_dictionary dictionary=Geant4__9_0_p01__ \
./Dictionaries/GeantFourRflx/v9r0p01/cmt/requirements: headerfiles=$(V9R0P01ROOT)/dict/Geant4Dict.h \
./Dictionaries/GeantFourRflx/v7r1p01a/cmt/requirements:macro Geant4_native_version "7.1.p01a"
./Dictionaries/GeantFourRflx/v7r1p01a/cmt/requirements:macro Geant4__7_1_p01a__Rflx_use_linkopts " -L$(Geant4_home)/lib \
./Dictionaries/GeantFourRflx/v7r1p01a/cmt/requirements:apply_pattern relax_dictionary dictionary=Geant4__7_1_p01a__ \
./Dictionaries/GeantFourRflx/v7r1p01a/cmt/requirements: headerfiles=$(GEANTFOURRFLXROOT)/dict/Geant4Dict.h \
./LCG_Interfaces/GeantFour/cmt/requirements:package Geant4
./LCG_Interfaces/GeantFour/cmt/requirements:macro Geant4_native_version __SPECIFY_MACRO__>>Geant4_native_version<<
./LCG_Interfaces/GeantFour/cmt/requirements:macro Geant4_home "$(LCG_external)/geant4/$(Geant4_native_version)/$(LCG_system)"
./LCG_Interfaces/GeantFour/cmt/requirements:include_dirs $(Geant4_home)/share/include
./LCG_Interfaces/GeantFour/cmt/requirements:macro Geant4_linkopts "-L$(Geant4_home)/lib " \
./LCG_Interfaces/GeantFour/cmt/requirements: WIN32 "/LIBPATH:$(Geant4_home)/lib "
[blyth@belle7 relax]$
Performing status on external item at 'lhcb'
M lhcb/Sim/GaussTools/cmt/requirements
A + lhcb/Sim/GaussTools/src/Components/GiGaRunActionGDML.cpp
A + lhcb/Sim/GaussTools/src/Components/GiGaRunActionGDML.h
M lhcb/Sim/GiGa/cmt/requirements
This seems too low level. Create G4DAE interface package and use that perhaps.:
[blyth@belle7 lhcb]$ svn diff Sim/GaussTools/cmt/requirements
Index: Sim/GaussTools/cmt/requirements
===================================================================
--- Sim/GaussTools/cmt/requirements (revision 22589)
+++ Sim/GaussTools/cmt/requirements (working copy)
@@ -31,6 +31,11 @@
apply_pattern component_library library=GaussTools
apply_pattern linker_library library=GaussToolsLib
+# SCB : enable GDML,DAE,WRL export by GiGaRunActionGDML
+macro_append GaussTools_cppflags " -DEXPORT_G4GDML=1 -DEXPORT_G4DAE=1 -DEXPORT_G4WRL=1 "
+macro_append GaussTools_linkopts " -lG4DAE "
+
+
# special linking with minimal G4RunManager to build genConf (necessary due
# to G4 User Actions requiring it to exist and have physic list assigned to it)
#============================================================================
This somehow seems wrong, the geant4 use with the appropriate tags should bring along the appropiate dependencies like XercesC.:
[blyth@belle7 lhcb]$ svn diff Sim/GiGa/cmt/requirements
Index: Sim/GiGa/cmt/requirements
===================================================================
--- Sim/GiGa/cmt/requirements (revision 22589)
+++ Sim/GiGa/cmt/requirements (working copy)
@@ -18,8 +18,15 @@
use GaudiAlg v*
macro geant4_use "G4readout v* Geant4" \
dayabay "Geant4 v* LCG_Interfaces"
+
+macro geant4_optional_use "" \
+ geant4_with_gdml "XercesC v* LCG_Interfaces"
+
use $(geant4_use)
+use $(geant4_optional_use)
+
+
Maybe adding library to geant4 means need some liblist action ?
At this point, you may choose one of two ways to compile and install the kernel libraries, depending on your needs and system resources. From $G4INSTALL/source:
make
This will make one library for each “leaf” category (maximum library granularity) and automatically produce a map of library use and dependencies.:
make global
This will make global libraries, one for each major category.
The main advantage of the first approach is the speed of building the libraries and of the application, which in some cases can be improved by a factor of two or three compared to the “global library” approach.
Using the “granular library” approach a fairly large number (roughly 90) of “leaf” libraries is produced. However, the dependencies and linking list are evaluated and generated automatically on the fly. The top-level GNUmakefile in $G4INSTALL/source parses the dependency files of Geant4 and produces a file libname.map in $G4LIB. libname.map is produced by the tool liblist, whose source code is in $G4INSTALL/config.
When building a binary application the script binmake.gmk in $G4INSTALL/config will parse the user’s dependency files and use libname.map to determine through liblist the required libraries to add to the linking list. Only the required libraries will be loaded in the link command.
The command make libmap issued from $G4INSTALL/source, allows manual rebuilding of the dependency map. The command is issued by default in the normal build process for granular libraries.
It is possible to install both “granular” and “compound” libraries, by typing “make” and “make global” in sequence. In this case, to choose usage of granular libraries at link time one should set the flag G4LIB_USE_GRANULAR in the environment; otherwise compound libraries will be adopted by default.
Looks appropriate:
27 G4DAE: G4volumes G4globman G4geometrymng G4geomdivision G4csg G4specsolids G4graphics_reps G4geomBoolean G4hepnumerics G4materials
28 source/persistency/dae/GNUmakefile
29 G4gdml: G4geometrymng G4globman G4geomdivision G4volumes G4csg G4specsolids G4graphics_reps G4geomBoolean G4hepnumerics G4materials
30 source/persistency/gdml/GNUmakefile
Performing status on external item at 'dybgaudi'
M dybgaudi/Simulation/G4DataHelpers/cmt/requirements
Settings like switching on GDML need to be global as it impacts the geant4 build and all dependencies of geant4.
Initially tried a technique coming out of ~/.dybinstrc but thats not convenient for cohabiting dybinstalls, so plump for greenfield dybinst option ./dybinst -X geant4_with_gdml trunk all That stresses the need for the greenfield build.
[blyth@belle7 ~]$ nuwa-;DYB=x nuwa-setup
Creating setup scripts.
Creating cleanup scripts.
[blyth@belle7 cmt]$ cd ~/e/geant4/geometry/export
[blyth@belle7 export]$ which nuwa.py
/data1/env/local/dybx/NuWa-trunk/dybgaudi/InstallArea/scripts/nuwa.py
[blyth@belle7 export]$ G4DAE_EXPORT_SEQUENCE=DVGX nuwa.py -n1 -m export_all
...
GiGaRunActionExport::BeginOfRunAction i 0 c D
FreeFilePath return ./g4_01.dae i 2
GiGaRunActionExport::WriteDAE to ./g4_01.dae recreatePoly 0
G4DAEWrite::Write addPointerToName 1 recreatePoly 0 nodeindex -1
G4DAE: Writing './g4_01.dae'...
G4DAE: Writing asset metadata...
G4DAE: Writing library_effects...
G4DAE: Writing library_geometries...
G4DAE: Writing library_materials...
G4DAE: Writing structure/library_nodes...
G4DAE: Writing library_visual_scenes...
G4DAE::GetBorderSurface ... /dd/Geometry/Sites/lvNearHallTop#pvNearTopCover[1000]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap14#pvStrip14Array#pvStrip14ArrayOne:1#pvStrip14Unit[1]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap14#pvStrip14Array#pvStrip14ArrayOne:2#pvStrip14Unit[2]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap14#pvStrip14Array#pvStrip14ArrayOne:3#pvStrip14Unit[3]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap14#pvStrip14Array#pvStrip14ArrayOne:4#pvStrip14Unit[4]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap14#pvStrip14Array#pvStrip14ArrayOne:5#pvStrip14Unit[5]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap14#pvStrip14Array#pvStrip14ArrayOne:6#pvStrip14Unit[6]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap14#pvStrip14Array#pvStrip14ArrayOne:7#pvStrip14Unit[7]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap14#pvStrip14Array#pvStrip14ArrayOne:8#pvStrip14Unit[8]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCBarCham14#pvRPCGasgap14[1000]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCFoam#pvBarCham14Array#pvBarCham14ArrayOne:1#pvBarCham14Unit[1]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCFoam#pvBarCham14Array#pvBarCham14ArrayOne:2#pvBarCham14Unit[2]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap23#pvStrip23Array#pvStrip23ArrayOne:1#pvStrip23Unit[1]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap23#pvStrip23Array#pvStrip23ArrayOne:2#pvStrip23Unit[2]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap23#pvStrip23Array#pvStrip23ArrayOne:3#pvStrip23Unit[3]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap23#pvStrip23Array#pvStrip23ArrayOne:4#pvStrip23Unit[4]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap23#pvStrip23Array#pvStrip23ArrayOne:5#pvStrip23Unit[5]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap23#pvStrip23Array#pvStrip23ArrayOne:6#pvStrip23Unit[6]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap23#pvStrip23Array#pvStrip23ArrayOne:7#pvStrip23Unit[7]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCGasgap23#pvStrip23Array#pvStrip23ArrayOne:8#pvStrip23Unit[8]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCBarCham23#pvRPCGasgap23[1000]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCFoam#pvBarCham23Array#pvBarCham23ArrayOne:1#pvBarCham23Unit[1]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCFoam#pvBarCham23Array#pvBarCham23ArrayOne:2#pvBarCham23Unit[2]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvRPCMod#pvRPCFoam[1000]
G4DAE::GetBorderSurface ... /dd/Geometry/Sites/lvNearHallTop#pvNearTeleRpc#pvNearTeleRpc:1[1]
G4DAE::GetBorderSurface ... /dd/Geometry/Sites/lvNearHallTop#pvNearTeleRpc#pvNearTeleRpc:2[2]
G4DAE::GetBorderSurface ... /dd/Geometry/RPC/lvNearRPCRoof#pvNearUnSlopModArray#pvNearUnSlopModOne:1#pvNearUnSlopMod:1#pvNearSlopModUnit[1]
It appears to succeed to do nothing, and was not too noisy, but may be some missing cleanup:
[blyth@belle7 ~]$ fenv
[blyth@belle7 ~]$ cd ~/e/geant4/geometry/export
[blyth@belle7 export]$
[blyth@belle7 export]$
[blyth@belle7 export]$ which nuwa.py
/data1/env/local/dyb/NuWa-trunk/dybgaudi/InstallArea/scripts/nuwa.py
[blyth@belle7 export]$ nuwa.py -n1 -m export_all
...
GiGa INFO Used Event Action Object is GiGaEventActionSequence/GiGa.EventSeq
GiGa INFO Used Run Action Object is GiGaRunActionExport/GiGa.GiGaRunActionExport
...
GiGaRunActionExport::BeginOfRunAction i 0 c V
GiGaRunActionExport::BeginOfRunAction i 1 c G
FreeFilePath return ./g4_01.gdml i 2
GiGaRunActionExport::BeginOfRunAction i 2 c D
FreeFilePath return ./g4_01.dae i 2
Start Run processing.
DsPmtModel checking if applicable to opticalphoton
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
Warning: G4MaterialPropertyVector::GetProperty
==> attempt to Retrieve Property above range
G4: Number of events processed : 1 Timer: User=2389.91s Real=2730.12s Sys=0.51s
ApplicationMgr INFO Application Manager Stopped successfully
GiGaGeo SUCCESS Exceptions/Errors/Warnings statistics: 0/0/2
GiGaGeo SUCCESS #WARNINGS = 2 Message=' g4LVolume() is the obsolete method, use volume()!'
GiGaGeo SUCCESS #WARNINGS = 1 Message='world():: Magnetic Field is not requested to be loaded '
ToolSvc INFO Removing all tools created by ToolSvc
GiGaGeo.DsPmtSensDet INFO DsPmtSensDet finalize
GiGaGeo.DsRpcSensDet INFO DsRpcSensDet finalize
GiGa.GiGaVis INFO GiGaVisManager:: finalize(): Delete the virualization manager
Graphics systems deleted.
Visualization Manager deleting...
GiGa.GiGaMgr INFO GiGaRunManager:: GiGaRunManager Finalization
ToolSvc.SequencerTimerTool INFO ------------------------------------------------------------------------------------------------
ToolSvc.SequencerTimerTool INFO This machine has a speed about 2.21 times the speed of a 2.8 GHz Xeon.
ToolSvc.SequencerTimerTool INFO Algorithm (millisec) | <user> | <clock> | min max | entries | total (s) |
ToolSvc.SequencerTimerTool INFO ------------------------------------------------------------------------------------------------
ToolSvc.SequencerTimerTool INFO ------------------------------------------------------------------------------------------------
*****Chrono***** INFO ****************************************************************************************************
*****Chrono***** INFO The Final CPU consumption ( Chrono ) Table (ordered)
*****Chrono***** INFO ****************************************************************************************************
GiGa.GiGaMgr::processTheEvent() INFO Time User : Tot= 39.8[min] #= 1
ChronoStatSvc INFO Time User : Tot= 41.9[min] #= 1
*****Chrono***** INFO ****************************************************************************************************
******Stat****** INFO ****************************************************************************************************
******Stat****** INFO The Final stat Table (ordered)
******Stat****** INFO ****************************************************************************************************
******Stat****** INFO Counter | # | sum | mean/eff^* | rms/err^* | min | max |
******Stat****** INFO "GiGaGeo:Warnin | 0 | 0 | 0.0000 | 0.0000 | 1.7977e+308 |-1.7977e+308 |
******Stat****** INFO ****************************************************************************************************
ChronoStatSvc.finalize() INFO Service finalized succesfully
ApplicationMgr INFO Application Manager Finalized successfully
ApplicationMgr INFO Application Manager Terminated successfully
Number of objects of type: GiGaRunManager created, but not destroyed:1
Number of objects of type: GiGaPhysConstructorBase created, but not destroyed:3
Number of objects of type: GiGaPhysicsConstructorBase created, but not destroyed:3
Number of objects of type: GiGaPhysicsListBase created, but not destroyed:1
Number of objects of type: GiGaPhysListBase created, but not destroyed:1
Number of objects of type: GiGaSensDetBase created, but not destroyed:2
GaudiTool WARNING Create/Destroy (mis)balance 'DsPhysConsEM/GiGa.GiGaPhysListModular.DsPhysConsEM' Counts = 1
GaudiTool WARNING Create/Destroy (mis)balance 'DsPhysConsGeneral/GiGa.GiGaPhysListModular.DsPhysConsGeneral' Counts = 1
GaudiTool WARNING Create/Destroy (mis)balance 'DsPhysConsOptical/GiGa.GiGaPhysListModular.DsPhysConsOptical' Counts = 1
GaudiTool WARNING Create/Destroy (mis)balance 'DsPmtSensDet/GiGaGeo.DsPmtSensDet' Counts = 1
GaudiTool WARNING Create/Destroy (mis)balance 'DsRpcSensDet/GiGaGeo.DsRpcSensDet' Counts = 1
GaudiTool WARNING Create/Destroy (mis)balance 'GiGaPhysListModular/GiGa.GiGaPhysListModular' Counts = 1
GaudiTool WARNING Create/Destroy (mis)balance 'GiGaRunManager/GiGa.GiGaMgr' Counts = 1
[blyth@belle7 export]$
Attach to see what the process is up to, propagating photons mostly:
494 operator[](size_type __n) const
(gdb) bt
#0 0x041f811a in std::vector<G4NavigationLevel, std::allocator<G4NavigationLevel> >::operator[] (this=0xc4045f4, __n=12) at /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_vector.h:494
#1 0x041f81a3 in G4NavigationHistory::GetTopTransform (this=0xc4045f4) at /data1/env/local/dyb/NuWa-trunk/../external/build/LCG/geant4.9.2.p01/source/geometry/volumes/include/G4NavigationHistory.icc:102
#2 0x0703aa3c in G4Navigator::ComputeLocalAxis (this=0xc4045e8, pVec=@0xbfd17220) at include/G4Navigator.icc:57
#3 0x070365cb in G4Navigator::ComputeStep (this=0xc4045e8, pGlobalpoint=@0xbfd17208, pDirection=@0xbfd17220, pCurrentProposedStepLength=47809528.913293302, pNewSafety=@0xbfd17238) at src/G4Navigator.cc:628
#4 0x04e096fa in G4Transportation::AlongStepGetPhysicalInteractionLength (this=0xc06d4e8, track=@0x10a5a5c8, currentMinimumStep=47809528.913293302, currentSafety=@0xbfd173b8, selection=0xc4042fc) at src/G4Transportation.cc:225
#5 0x06e23e1b in G4VProcess::AlongStepGPIL (this=0xc06d4e8, track=@0x10a5a5c8, previousStepSize=17.522238749144233, currentMinimumStep=47809528.913293302, proposedSafety=@0xbfd173b8, selection=0xc4042fc)
at /data1/env/local/dyb/NuWa-trunk/../external/build/LCG/geant4.9.2.p01/source/processes/management/include/G4VProcess.hh:447
#6 0x06e22849 in G4SteppingManager::DefinePhysicalStepLength (this=0xc4041f0) at src/G4SteppingManager2.cc:235
#7 0x06e1ee2c in G4SteppingManager::Stepping (this=0xc4041f0) at src/G4SteppingManager.cc:181
#8 0x06e2d50a in G4TrackingManager::ProcessOneTrack (this=0xc4041c8, apValueG4Track=0x10a5a5c8) at src/G4TrackingManager.cc:126
#9 0x06ea024f in G4EventManager::DoProcessing (this=0xc4039d8, anEvent=0x102ccca8) at src/G4EventManager.cc:185
#10 0x06ea09e6 in G4EventManager::ProcessOneEvent (this=0xc4039d8, anEvent=0x102ccca8) at src/G4EventManager.cc:335
#11 0xb4d2b5e8 in GiGaRunManager::processTheEvent (this=0xc403170) at ../src/component/GiGaRunManager.cpp:207
#12 0xb4d2a522 in GiGaRunManager::retrieveTheEvent (this=0xc403170, event=@0xbfd17cf8) at ../src/component/GiGaRunManager.cpp:158
#13 0xb4d0664f in GiGa::retrieveTheEvent (this=0xc402778, event=@0xbfd17cf8) at ../src/component/GiGa.cpp:469
#14 0xb4d03564 in GiGa::operator>> (this=0xc402778, event=@0xbfd17cf8) at ../src/component/GiGaIGiGaSvc.cpp:73
#15 0xb4d012fa in GiGa::retrieveEvent (this=0xc402778, event=@0xbfd17cf8) at ../src/component/GiGaIGiGaSvc.cpp:211
#16 0xb4f4acd3 in DsPullEvent::execute (this=0xc3f5d00) at ../src/DsPullEvent.cc:54
#17 0x069c1408 in Algorithm::sysExecute (this=0xc3f5d00) at ../src/Lib/Algorithm.cpp:558
#18 0x0350ed4e in DybBaseAlg::sysExecute (this=0xc3f5d00) at ../src/lib/DybBaseAlg.cc:53
#19 0x02cc6fd4 in GaudiSequencer::execute (this=0xbeb8140) at ../src/lib/GaudiSequencer.cpp:100
#20 0x069c1408 in Algorithm::sysExecute (this=0xbeb8140) at ../src/Lib/Algorithm.cpp:558
#21 0x02c5e68f in GaudiAlgorithm::sysExecute (this=0xbeb8140) at ../src/lib/GaudiAlgorithm.cpp:161
#22 0x06a3d41a in MinimalEventLoopMgr::executeEvent (this=0xba77900) at ../src/Lib/MinimalEventLoopMgr.cpp:450
#23 0x038ba956 in DybEventLoopMgr::executeEvent (this=0xba77900, par=0x0) at ../src/DybEventLoopMgr.cpp:125
#24 0x038bb18a in DybEventLoopMgr::nextEvent (this=0xba77900, maxevt=1) at ../src/DybEventLoopMgr.cpp:188
#25 0x06a3bdbd in MinimalEventLoopMgr::executeRun (this=0xba77900, maxevt=1) at ../src/Lib/MinimalEventLoopMgr.cpp:400
#26 0x093096d9 in ApplicationMgr::executeRun (this=0xb744aa0, evtmax=1) at ../src/ApplicationMgr/ApplicationMgr.cpp:867
#27 0x0829bf57 in method_3426 (retaddr=0xc4f7d00, o=0xb744ecc, arg=@0xb7b0c20) at ../i686-slc5-gcc41-dbg/dict/GaudiKernel/dictionary_dict.cpp:4375
#28 0x001d6add in ROOT::Cintex::Method_stub_with_context (context=0xb7b0c18, result=0xc53d26c, libp=0xc53d2c4) at cint/cintex/src/CINTFunctional.cxx:319
#29 0x0330e034 in ?? ()
#30 0x0b7b0c18 in ?? ()
#31 0x0c53d26c in ?? ()
#32 0x00000000 in ?? ()
Current language: auto; currently c++
(gdb)
Continuing.:
Program received signal SIGINT, Interrupt.
[Switching to Thread -1208088368 (LWP 13703)]
__gnu_cxx::__normal_iterator<G4MPVEntry* const*, std::vector<G4MPVEntry*, std::allocator<G4MPVEntry*> > >::base (this=0xbfd171d0) at /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_iterator.h:715
715 base() const
(gdb) bt
#0 __gnu_cxx::__normal_iterator<G4MPVEntry* const*, std::vector<G4MPVEntry*, std::allocator<G4MPVEntry*> > >::base (this=0xbfd171d0) at /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_iterator.h:715
#1 0xb6063b4e in __gnu_cxx::operator-<G4MPVEntry* const*, G4MPVEntry* const*, std::vector<G4MPVEntry*, std::allocator<G4MPVEntry*> > > (__lhs=@0xbfd171d0, __rhs=@0xbfd171cc)
at /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_iterator.h:809
#2 0xb6063bca in std::vector<G4MPVEntry*, std::allocator<G4MPVEntry*> >::size (this=0xc2aba50) at /usr/lib/gcc/i386-redhat-linux/4.1.2/../../../../include/c++/4.1.2/bits/stl_vector.h:402
#3 0xb6062518 in G4MaterialPropertyVector::GetAdjacentBins (this=0xc2aba50, aPhotonEnergy=3.1289435029520031e-06, left=0xbfd17244, right=0xbfd17240) at src/G4MaterialPropertyVector.cc:395
#4 0xb6062be9 in G4MaterialPropertyVector::GetProperty (this=0xc2aba50, aPhotonEnergy=3.1289435029520031e-06) at src/G4MaterialPropertyVector.cc:225
#5 0x04701884 in G4OpAbsorption::GetMeanFreePath (this=0xc337b70, aTrack=@0x10ee0068) at src/G4OpAbsorption.cc:139
#6 0x04d5357a in G4VDiscreteProcess::PostStepGetPhysicalInteractionLength (this=0xc337b70, track=@0x10ee0068, previousStepSize=0, condition=0xc4042f8)
at /data1/env/local/dyb/NuWa-trunk/../external/build/LCG/geant4.9.2.p01/source/processes/management/include/G4VDiscreteProcess.hh:152
#7 0x06e23e95 in G4VProcess::PostStepGPIL (this=0xc337b70, track=@0x10ee0068, previousStepSize=0, condition=0xc4042f8) at /data1/env/local/dyb/NuWa-trunk/../external/build/LCG/geant4.9.2.p01/source/processes/management/include/G4VProcess.hh:464
#8 0x06e2255a in G4SteppingManager::DefinePhysicalStepLength (this=0xc4041f0) at src/G4SteppingManager2.cc:165
#9 0x06e1ee2c in G4SteppingManager::Stepping (this=0xc4041f0) at src/G4SteppingManager.cc:181
#10 0x06e2d50a in G4TrackingManager::ProcessOneTrack (this=0xc4041c8, apValueG4Track=0x10ee0068) at src/G4TrackingManager.cc:126
#11 0x06ea024f in G4EventManager::DoProcessing (this=0xc4039d8, anEvent=0x102ccca8) at src/G4EventManager.cc:185
#12 0x06ea09e6 in G4EventManager::ProcessOneEvent (this=0xc4039d8, anEvent=0x102ccca8) at src/G4EventManager.cc:335
#13 0xb4d2b5e8 in GiGaRunManager::processTheEvent (this=0xc403170) at ../src/component/GiGaRunManager.cpp:207
#14 0xb4d2a522 in GiGaRunManager::retrieveTheEvent (this=0xc403170, event=@0xbfd17cf8) at ../src/component/GiGaRunManager.cpp:158
#15 0xb4d0664f in GiGa::retrieveTheEvent (this=0xc402778, event=@0xbfd17cf8) at ../src/component/GiGa.cpp:469
#16 0xb4d03564 in GiGa::operator>> (this=0xc402778, event=@0xbfd17cf8) at ../src/component/GiGaIGiGaSvc.cpp:73
#17 0xb4d012fa in GiGa::retrieveEvent (this=0xc402778, event=@0xbfd17cf8) at ../src/component/GiGaIGiGaSvc.cpp:211
#18 0xb4f4acd3 in DsPullEvent::execute (this=0xc3f5d00) at ../src/DsPullEvent.cc:54
#19 0x069c1408 in Algorithm::sysExecute (this=0xc3f5d00) at ../src/Lib/Algorithm.cpp:558
#20 0x0350ed4e in DybBaseAlg::sysExecute (this=0xc3f5d00) at ../src/lib/DybBaseAlg.cc:53
#21 0x02cc6fd4 in GaudiSequencer::execute (this=0xbeb8140) at ../src/lib/GaudiSequencer.cpp:100
#22 0x069c1408 in Algorithm::sysExecute (this=0xbeb8140) at ../src/Lib/Algorithm.cpp:558
#23 0x02c5e68f in GaudiAlgorithm::sysExecute (this=0xbeb8140) at ../src/lib/GaudiAlgorithm.cpp:161
#24 0x06a3d41a in MinimalEventLoopMgr::executeEvent (this=0xba77900) at ../src/Lib/MinimalEventLoopMgr.cpp:450
#25 0x038ba956 in DybEventLoopMgr::executeEvent (this=0xba77900, par=0x0) at ../src/DybEventLoopMgr.cpp:125
#26 0x038bb18a in DybEventLoopMgr::nextEvent (this=0xba77900, maxevt=1) at ../src/DybEventLoopMgr.cpp:188
#27 0x06a3bdbd in MinimalEventLoopMgr::executeRun (this=0xba77900, maxevt=1) at ../src/Lib/MinimalEventLoopMgr.cpp:400
#28 0x093096d9 in ApplicationMgr::executeRun (this=0xb744aa0, evtmax=1) at ../src/ApplicationMgr/ApplicationMgr.cpp:867
#29 0x0829bf57 in method_3426 (retaddr=0xc4f7d00, o=0xb744ecc, arg=@0xb7b0c20) at ../i686-slc5-gcc41-dbg/dict/GaudiKernel/dictionary_dict.cpp:4375
#30 0x001d6add in ROOT::Cintex::Method_stub_with_context (context=0xb7b0c18, result=0xc53d26c, libp=0xc53d2c4) at cint/cintex/src/CINTFunctional.cxx:319
#31 0x0330e034 in ?? ()
#32 0x0b7b0c18 in ?? ()
#33 0x0c53d26c in ?? ()
#34 0x00000000 in ?? ()
(gdb) c
It would be nice to do export with a simple:
nuwa.py -X
BUT, below attempted implementation approach fails as need to setup a generator as done in ~/e/geant4/geometry/export/export_all.py. But thats too specific a thing to do inside nuwa.py.
Perhaps using an earlier hook than GiGaRunAction can avoid this requirement. Need to understand GiGa details to make progress with this.
[blyth@belle7 DybPython]$ svn st
M python/DybPython/cmdline.py
M python/DybPython/Control.py
[blyth@belle7 DybPython]$ svn diff
Index: python/DybPython/cmdline.py
===================================================================
--- python/DybPython/cmdline.py (revision 22643)
+++ python/DybPython/cmdline.py (working copy)
@@ -134,6 +134,9 @@
parser.add_argument("-G", "--detector",default= "",
help="Specify a non-default, top-level geometry file")
+ parser.add_argument("-X", "--export",action="store_true", default=False,
+ help="Export Geant4 detector geometry in DAE,GDML,WRL formats. Requires special build with geant4_with_dae tag.")
+
parser.add_argument("-K", "--leak-check-execute",action="store_true",default= False,
help="Use Hephaestus memory tracker")
parser.add_argument("--leak-check-method",action="append",
Index: python/DybPython/Control.py
===================================================================
--- python/DybPython/Control.py (revision 22643)
+++ python/DybPython/Control.py (working copy)
@@ -606,7 +606,59 @@
XmlDetDesc.Configure()
return
+ def configure_geometry_export(self):
+ """
+ When the `-X` or `--export` option is provided
+ to nuwa.py this configures geometry exporting
+ by GiGaRunActionExport at the begin of run.
+ For standard dybinstalls this is expected to run without error
+ but perform no exports.
+
+ For special dybinstalls with the geant4_with_dae CMTEXTRATAGS
+ this will export the Geant4 geometry into multiple files
+ in formats:
+
+ DAE
+ Standard 3D XML file format (COLLADA) with material and
+ surface properties as a function of wavelength
+ in metadata "extra" tags. Geometry scenegraph is retained.
+ GDML
+ Geant4 "native" persistency format
+ WRL
+ Primitive VRML2 3D file format (form the 1990s)
+ with flattened scenegraph
+
+ The details are controlled by 2 envvars:
+
+ G4DAE_EXPORT_DIR
+ Directory into which the geometry files are writted, default is "."
+ G4DAE_EXPORT_SEQUENCE
+ String controlling the export order, eg with "DGV"
+ for export sequence: DAE, GDML, WRL
+
+ """
+ if not self.opts.export:
+ log.info("SKIPPING geometry export setup ")
+ return
+
+ log.info("configure geometry export via GiGaRunActionExport")
+ from GiGa.GiGaConf import GiGa, GiGaRunManager
+ giga = GiGa("GiGa")
+ gigarm = GiGaRunManager("GiGa.GiGaMgr")
+ gigarm.Verbosity = 2 # skip dumping particle properties
+
+ from GaussTools.GaussToolsConf import GiGaRunActionExport
+ export = GiGaRunActionExport("GiGa.GiGaRunActionExport")
+ giga.RunAction = export
+ giga.VisManager = "GiGaVisManager/GiGaVis"
+
+ import DetSim
+ site = 'DayaBay'
+ DetSim.Configure(physlist=DetSim.physics_list_basic,site=site)
+
+
+
def configure_optmods(self):
""" load and configure() "-m" modules here """
if self.opts.module == None: return
@@ -824,6 +876,7 @@
self.configure_dbi()
self.configure_job()
self.configure_geometry()
+ self.configure_geometry_export()
self.configure_user()
self.configure_post_user()
return
[blyth@belle7 DybPython]$
[blyth@belle7 ~]$ nuwa-
[blyth@belle7 ~]$ DYB=x nuwa-setup
[blyth@belle7 cmt]$ cmt show tags | grep geant4_with_dae
geant4_with_dae (from CMTEXTRATAGS)
[blyth@belle7 cmt]$
[blyth@belle7 cmt]$ pwd
/data1/env/local/dybx/NuWa-trunk/dybgaudi/DybRelease/cmt
[blyth@belle7 cmt]$ cd $(DYB=x nuwa-g4-cmtdir); pwd
/data1/env/local/dybx/NuWa-trunk/lcgcmt/LCG_Builders/geant4/cmt
cd ~/e/geant4/geometry/DAE
[blyth@belle7 DAE]$ ./make.sh
NB NON-STANDARD DYB x
Making dependency for file src/G4DAEWriteStructure.cc ...
...
After recreating libG4DAE.so it becomes unusable via GaudiPython:
EventClockSvc.FakeEventTime INFO Event times generated from 0 with steps of 0
Generator INFO Added gen tool GtTransformTool/onemuonTransformer
AlgorithmManager ERROR Algorithm of type GiGaInputStream is unknown (No factory available).
AlgorithmManager ERROR /data1/env/local/dybx/NuWa-trunk/../external/geant4/4.9.2.p01/i686-slc5-gcc41-dbg/lib/libG4DAE.so: undefined symbol: _ZN15G4DAEWriteAsset10AssetWriteEPN11xercesc_2_810DOMElementE
AlgorithmManager ERROR More information may be available by setting the global jobOpt "ReflexPluginDebugLevel" to 1
GaudiSequencer WARNING Unable to find or create GiGaInputStream
AlgorithmManager ERROR Algorithm of type DsPushKine is unknown (No factory available).
AlgorithmManager ERROR /data1/env/local/dybx/NuWa-trunk/../external/geant4/4.9.2.p01/i686-slc5-gcc41-dbg/lib/libG4DAE.so: undefined symbol: _ZN15G4DAEWriteAsset10AssetWriteEPN11xercesc_2_810DOMElementE
AlgorithmManager ERROR More information may be available by setting the global jobOpt "ReflexPluginDebugLevel" to 1
GaudiSequencer WARNING Unable to find or create DsPushKine
AlgorithmManager ERROR Algorithm of type DsPullEvent is unknown (No factory available).
AlgorithmManager ERROR /data1/env/local/dybx/NuWa-trunk/../external/geant4/4.9.2.p01/i686-slc5-gcc41-dbg/lib/libG4DAE.so: undefined symbol: _ZN15G4DAEWriteAsset10AssetWriteEPN11xercesc_2_810DOMElementE
AlgorithmManager ERROR More information may be available by setting the global jobOpt "ReflexPluginDebugLevel" to 1
GaudiSequencer WARNING Unable to find or create DsPullEvent
GaudiSequencer INFO Member list:
EventLoopMgr ERROR Unable to initialize Algorithm: GaudiSequencer
EventLoopMgr WARNING Error Initializing base class MinimalEventLoopMgr.
ServiceManager ERROR Unable to initialize Service: EventLoopMgr
ApplicationMgr INFO Application Manager Terminated successfully
BUT Somewhat surprisingly (because the ROOT/Reflex/GaudiPython/.. dict/conf morass is not updated) just doing a clean succeeds:
cd ~/e/geant4/geometry/DAE
[blyth@belle7 DAE]$ ./make.sh clean
NB NON-STANDARD DYB x
Making dependency for file src/G4DAEWriteStructure.cc ...
...